jenes.stage

Class Parallel<T extends Chromosome>

java.lang.Object

jenes.stage.AbstractStage<T>

jenes.stage.Parallel<T>

Type Parameters:

T - The class chromosomes flowing across the stage.

public class Parallel<T extends Chromosome>
extends AbstractStage<T>

A parallel is formed by differents branches; each branch receives a subpopolation according to the population dispenser used (see Dispenser.distribute(Population, Population[])).

Each branch is a stage and can be added with the add(AbstractStage) method. The output population is obtained merging the output of each branch. The dispenser is responsable of this merging.

Note: generally a dispenser can add the same input individual in different branches. So don't modify the stages input individuals.

Since:

1.0

Version:

2.0

See Also:

Dispenser, ExclusiveDispenser

Field Summary

Fields inherited from class jenes.stage.AbstractStage

biggerIsBetter, fitness, ga

Constructor Summary

Constructors

Constructor and Description
Parallel(Dispenser<T> dispenser) Constructs a new parallel stage with the specified dispenser.

Method Summary

Methods

Modifier and Type	Method and Description
void	add(AbstractStage<T> stage) Adds a new branch to this parallel stage.
void	dispose() Disposes this stage
protected void	distribute(Population<T> in, Population<T>[] branches) Distributes the specified population between those ones in the specified array.
void	init(GeneticAlgorithm<T> ga) Initializes this stage according to the genetic algorithm that uses it
protected void	mergePopulation(Population<T>[] branches, Population<T> out) Merges the populations within the specified array in the specified one.
void	process(Population<T> in, Population<T> out) Processes the input population and tranforms it into the output population.
void	remove(AbstractStage<T> stage) Removes a stage from the parallel andall the stages it contains.
void	remove(int index) Removes a specified branch from the parallel
void	removeAllBranches() Removes all the branch stages from this parallel
void	setBiggerIsBetter(boolean flag, boolean recursively) Deprecated.
void	setBranch(int index, AbstractStage<T> stage) Sets the specified stage at the specified branch number replacing the stage already present
void	setFitness(Fitness fit, boolean recursively) Change the Fitness to this stage propagating the change recursively according to the flag given as parameter

Methods inherited from class jenes.stage.AbstractStage

getFitness, isBiggerBetter, isFitnessChanged, setBiggerIsBetter, setFitness

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Parallel

public Parallel(Dispenser<T> dispenser)

Constructs a new parallel stage with the specified dispenser.

Parameters:

dispenser - the dispenser to use in the distribute and merge operations

Method Detail

add

public void add(AbstractStage<T> stage)

Adds a new branch to this parallel stage.

Parameters:

stage - the stage to be added as branch

remove

public void remove(AbstractStage<T> stage)

Removes a stage from the parallel andall the stages it contains. The specified stage is a branch stage container, so after it the branch will be empty.

Parameters:

stage - the stage to remove

remove

public void remove(int index)

Removes a specified branch from the parallel

Parameters:

index - the branch index to remove

setBranch

public void setBranch(int index,
             AbstractStage<T> stage)

Sets the specified stage at the specified branch number replacing the stage already present

Parameters:

index - the branch number where to set the new stage

stage - the stage to add

removeAllBranches

public void removeAllBranches()

Removes all the branch stages from this parallel

init

public void init(GeneticAlgorithm<T> ga)
          throws StageException

Description copied from class: AbstractStage

Initializes this stage according to the genetic algorithm that uses it

Overrides:

init in class AbstractStage<T extends Chromosome>

Parameters:

ga - the Genetic Algorithm in wchic this stage run

Throws:

StageException

dispose

public void dispose()

Description copied from class: AbstractStage

Disposes this stage

Overrides:

dispose in class AbstractStage<T extends Chromosome>

process

public final void process(Population<T> in,
           Population<T> out)
                   throws StageException

Description copied from class: AbstractStage

Processes the input population and tranforms it into the output population. Note: - Out population is made of recicled individuals. There is a need of new individuals to add only when there is a need to increase the population size. For pre-initalized individual just use setAs method. This is done for an efficient memory management. - A stage can modify the input population. So input passed to process method can be mutated when the process method ends.

Specified by:

process in class AbstractStage<T extends Chromosome>

Parameters:

in - the input population

out - the output population

Throws:

StageException

distribute

protected void distribute(Population<T> in,
              Population<T>[] branches)

Distributes the specified population between those ones in the specified array. If some populations within inStagePop are not empty they will contain the initial individuals too at the end of distribute operation.

Parameters:

in - he population to distribute

branches - the array of sub populations to fill

mergePopulation

protected void mergePopulation(Population<T>[] branches,
                   Population<T> out)

Merges the populations within the specified array in the specified one. If population is not empty it will contain the initial individuals too at the end of merge operation.

Parameters:

branches - the populations to be merged

out - the final population

setBiggerIsBetter

@Deprecated
public void setBiggerIsBetter(boolean flag,
                                boolean recursively)

Deprecated.

Overrides:

setBiggerIsBetter in class AbstractStage<T extends Chromosome>

Parameters:

flag - true, if the best individual has the higher fitness

recursively - true, to propagate this setting down, otherwise false.

setFitness

public void setFitness(Fitness fit,
              boolean recursively)

Description copied from class: AbstractStage

Change the Fitness to this stage propagating the change recursively according to the flag given as parameter

Overrides:

setFitness in class AbstractStage<T extends Chromosome>