A B C D E F G I J K L M N O P R S T U V W X

C

Chromosome<T extends Chromosome> - Interface in jenes.chromosome

The abstract class Chromosome is the superclass of all chromosomes, providing the specification of genoma operations used by genetic operators during the algorithm evolution.

CHROMOSOME_SIZE - Variable in class jenes.performance.DeJongTest

clear() - Method in class jenes.population.Population

Removes all the individuals from this population.

clone() - Method in class jenes.chromosome.BitwiseChromosome

Makes a chromosome copy

clone() - Method in class jenes.chromosome.BooleanChromosome

clone() - Method in interface jenes.chromosome.Chromosome

Performs a chromosome deep-cloning.

clone() - Method in class jenes.chromosome.DoubleChromosome

clone() - Method in class jenes.chromosome.IntegerChromosome

clone() - Method in class jenes.chromosome.ObjectChromosome

clone() - Method in class jenes.chromosome.ObjectChromosome.Gene

clone() - Method in class jenes.chromosome.PermutationChromosome

clone() - Method in class jenes.population.Individual

Returns a cloned instance of this class

close() - Method in class jenes.statistics.StatisticsLogger

Closes the undelying logger.

close() - Method in class jenes.utils.AbstractLogger

Saves cached records on media and closes the logger.

closed - Variable in class jenes.utils.AbstractLogger

Color - Enum in jenes.tutorials.problem5

Tutorial illustrating the use of object-oriented chromosomes, whose allele set can be defined by the user for each gene.

compareTo(Individual<T>) - Method in class jenes.population.Individual

Compares this individual with the specified individual.

convert(int) - Method in class jenes.performance.DeJongTest

createRandom(int, double, double) - Static method in class jenes.tutorials.problem5.DoubleAlleleSet

Builds a DoubleAlleleSet with random values within the range [lowerBound,upperBound]

createRandom(int, int, int) - Static method in class jenes.tutorials.problem5.IntegerAlleleSet

Builds an IntegerAlleleSet with random values within the range [lowerBound,upperBound]

createUniform(int, int, int) - Static method in class jenes.tutorials.problem5.DoubleAlleleSet

Builds a new DoubleAlleleSet with uniformly distributed values within the range [lowerBound,upperBound]

createUniform(int, int, int) - Static method in class jenes.tutorials.problem5.IntegerAlleleSet

Builds a new IntegerAlleleSet with uniformly distributed values within the range [lowerBound,upperBound]

cross(BitwiseChromosome, int, int) - Method in class jenes.chromosome.BitwiseChromosome

Exchanges the chromosome bits in the range [from,to].

cross(BitwiseChromosome, int) - Method in class jenes.chromosome.BitwiseChromosome

Exchanges the chromosome bits from the specified cross site to the final position

cross(BooleanChromosome, int) - Method in class jenes.chromosome.BooleanChromosome

cross(BooleanChromosome, int, int) - Method in class jenes.chromosome.BooleanChromosome

cross(T, int, int) - Method in interface jenes.chromosome.Chromosome

Exchanges the genes chromosome within the range [from,to]

cross(T, int) - Method in interface jenes.chromosome.Chromosome

Exchanges the genes chromosome starting from a given position

cross(DoubleChromosome, int) - Method in class jenes.chromosome.DoubleChromosome

cross(DoubleChromosome, int, int) - Method in class jenes.chromosome.DoubleChromosome

cross(IntegerChromosome, int) - Method in class jenes.chromosome.IntegerChromosome

cross(IntegerChromosome, int, int) - Method in class jenes.chromosome.IntegerChromosome

cross(ObjectChromosome, int) - Method in class jenes.chromosome.ObjectChromosome

cross(ObjectChromosome, int, int) - Method in class jenes.chromosome.ObjectChromosome

cross(PermutationChromosome, int) - Method in class jenes.chromosome.PermutationChromosome

cross(PermutationChromosome, int, int) - Method in class jenes.chromosome.PermutationChromosome

cross(Individual<IntegerChromosome>[]) - Method in class jenes.performance.TSPCrossover

cross(Individual<T>[]) - Method in class jenes.stage.operator.common.OnePointCrossover

cross(Individual<T>[]) - Method in class jenes.stage.operator.common.TwoPointsCrossover

cross(Individual<T>[]) - Method in class jenes.stage.operator.Crossover

Executes the crossover.

cross(Individual<IntegerChromosome>[]) - Method in class jenes.tutorials.problem3.TSPCityCenteredCrossover

This method implements the crossover operation.

Crossover<T extends Chromosome> - Class in jenes.stage.operator

A genetic class representing a crossover operator.

Crossover(double) - Constructor for class jenes.stage.operator.Crossover

Constructs a new crossover instance with the specified crossover probability

Crossover.Statistics - Class in jenes.stage.operator

A statistics object holding the number of crossover performed and the time spent to execute them.

Crossover.Statistics() - Constructor for class jenes.stage.operator.Crossover.Statistics

crossovers - Variable in class jenes.stage.operator.Crossover.Statistics

Number of crossovers performed.

CSVLogger - Class in jenes.utils

This class defines a StatisticsLogger based on CSV (comma separated values) file.

CSVLogger(String[]) - Constructor for class jenes.utils.CSVLogger

Creates a logger with the specified schema, and log.csv as default filename, tab as default separator.

CSVLogger(String[], String) - Constructor for class jenes.utils.CSVLogger

Creates a logger with the specified schema and filename, tab as default separator.

CSVLogger(String[], String, String) - Constructor for class jenes.utils.CSVLogger

Creates a logger with the specified schema, filename and separator.

CSVLogger(String[], String, String, boolean) - Constructor for class jenes.utils.CSVLogger

Creates a logger with the specified schema, filename and separator.